Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898835.1_cds_XP_016448795.1_43414
CDS Infomation

[gene=LOC107773884] [db_xref=GeneID:107773884] [protein=uncharacterized protein LOC107773884] [partial=5'] [protein_id=XP_016448795.1] [location=complement(join(1145..1310,1786..2237,2808..2954,3057..5135,5262..5369,5479..5565,5658..5747,5896..>5982))] [gbkey=CDS]
Sequence

GGGCTAATTGCTTTGAAGAAAGGTACACAACTAATAAAGTATAGCCGGAAGGGGAAGCCT
AAGTTCTGCCCTTTCAGAGTTTCTCCGGATGAAACAACGTTAATTTGGTACTCTCGTGGA
GCAGAAAGGAATTTAAAGCTATCTTCAGTTTCAAAAATTATTCCTGGCCAGAGAACTCCT
GTTTTTAAAAGATATTTGCGTCCAGAGAAGGAGTACTTGTCATTTTCCCTTATATACAAT
AATGGTGAAAGATCTCTAGATCTGATTTGCAAGGATAAAATTGAAGCAGAGATTTGGATT
GCTGGTCTAAAGAATTTAATTTCAGCTGGCCAAGCTCGTAATAGTAGACGTACTCAGAGT
GATATTTCTGATTTACAAAATACCCATCCATGTGGTTCAACATTAGATTTCAGCCAAACT
ATTGCTCGGGATTGGACATCTGCTGATCACTATAGTGGTGAAACTTCCTTGAGTGTTCGA
AGCTCAGATGTGGGGTCTGAACGTGGAAATATGCAAGTAAGAACAAGTTCGGATGGTTTC
CGTATTAGTGTCTCTAGCACTCCAAGTTGTTCGAGTGGGGGTTCCGGGCCAGATGACATA
GAATCATTAGGTGATGTTTATGTGTGGGGGGAAATTTGGTGTGATGGAGTGTCAAAAGAT
GGAGCCGGGAATCCAATTACCATTAAACATGATGTACTTAGTCCTAAACCTTTGGAGTCG
AACGTGGTTCTTGATGTTCATCAAATTGCTTGTGGGGTACGACACATTGCTCTTGTTACA
AGGCAAGGAGAGGTTTTCACTTGGGGAGAAGAGTCTGGTGGCAGGCTAGGTCATGGAATT
GAAAAGGATTTTAGTCGCCCTCGGCTTGTTGAATTTCTGGCTGTTACAAACGTCGATTTT
GTTTCATGTGGCGAGTATCATACCTGTGCTGTGTCTACATTGGGTGATTTATATACTTGG
GGAGATGGAACTCACAATGCTGGACTTCTTGGGCATGGCAATGATGTTAGCCATTGGATT
CCTAAAAGAGTTTCCGGTCCTCTTGAAGGGCTTCAAGTTTTATCAGTTGCGTGTGGCACG
TGGCATTCAGCTTTGGCAACTGCAAATGGAAAACTATTCACATTTGGGGATGGATCATTT
GGAGTTTTAGGTCATGGCGATCGTGAAAGTGTACTGTATCCCAAGGAAGTTCAATCGTTG
AACGGACTCAAGACGATTAAAGTTGCGTGTGGTGTGTGGCACACGGCTGCTATTGTGGAA
GTCACAAACCATAACTGTGGAAATGTGCCCACTAGAAAGTTATTCACTTGGGGAGATGGT
GATAAGAATAGATTAGGTCATGGAAATAAGGAAACTTATCTGCTTCCGACTTGTGTCTCT
GCAATTATCGATTACAACTTCCATCAGTTAGCATGCGGACATAATATAACCGTTGGTCTT
ACCACATCCGGTCATGTCTTTATCATGGGAAGCAATGCATATGGTCAGCTAGGCAATCCA
CAGGCCGATGGAAAGGTCCCGTCCCTTGTACAAGATAAATTGGTAGGTGAATTCGTCGAA
GAAATAGTATGTGGTGCATTCCATGTTGCTGTCCTTACATCAAGAAGTGAAGTCTTTACG
TGGGGAAAAGGCGCTAACGGAAGGTTAGGTCATGGTGATACAGAAGATCGGAACGCTCCA
ACATTAGTTGAGGCCTTAAAAGACAGGCATGTGAAGAACATAGCATGTGGCTCTAATTAC
ACTGCTAGTATTTGCATTCATAAGTGGGTATCAGGAGCAGATCAATCTGTTTGCTCAGGT
TGTCGACAAGCATTTGGATTTACTCGAAAGAGGCATAACTGTTATAATTGTGGACTAGTT
CATTGTCATGCTTGCAGTTCAAAAAAAGCACTCAAAGCTGCACTTGCTCCGACACCAGGA
AAACCACATCGCGTTTGTGAATCTTGCTACATGAAATTGAAAAAGGCTTCCGAAGGAAGT
TCCTCATTTTATGATAAGAAATTTAACTCCTCTCATCGACCAGAGAATAGTAAGTTAGAC
AGAGGCGAGCCAAAAACATCACGGGTTTTGCTCTCACCCACTGTAGAACCGATTAAGTAC
CTTGAAGTTAAGTCTACTAGGCCTGGCATCAAATCAGATTCTCTAAGTATAGTGAGAGCT
TCACAAGTTCCATCACTTTTGCAATTAAAAGATATCGCTTTTCCAAGTTCACTTAGCGCT
CTTCAACATGCGTTGAAGCCTGTTGTGACCGCGCAACCTCAGCCTCAATCTCACTCTCAA
TCGCAATCTCAATCTCAACCTCCTTCATCCAACTCTAGACCTGCTTCACCGTACTCTAGA
AGACCAAGTCCTCCGCGCTCCCCCGCTCCTGTTTTTTCAAGGGGTGTAATCGATAGTCTT
AGAAAGACAAATGATGTATTACACCAAGAAGTTGCCAAATTGCAAAACCAGATCAAAAGT
TTAAAGCAGAAAAGTGATGGACAAGATGCTGAAATCAAAAAATTGAAGGAAAGTTCTCAA
GAATCATCTAGGTTGGTTGCAGAGAGAGCATCAAAGTGTAATATCGCGGTGGAAACCATG
AAGTCTATTACTGCTCAATTGAAAGAAATGACACAAGAACTACCTCCTGATATCTCTGAG
AGTTCAGCCCTGAAATCCATACAAACTCAGGTTGAATCTTTTCTTAATACATTCGGAAAC
CAAGCATCTGAAGACAACACTTCTCTGTCATCCGATATGTCTTATAATCAACAGAAGCCA
ACACATAGAAATAATCTATCTTCTGAGTCTGTCATTAGAAATGATCAATGGGATGCTGCT
GGAGTTCAAGAAACATCACATAATGTTGATGGAACTATACGTGAAAATCACGGACAATCA
GCTTCAGAAACAAGAGGTGTACATCAATCAAGCGCGGAAAGTGTCTCAGGGTCACCTAAA
GCTCAAAGAGAGGGACAAAAGGAAGTTATTGAACAATTTGAACCGGGCGTCTACGTTACT
CTACTTCAACTTACAAATGGCACCAAGATCTTCAAGCGCGTTAGGTTCAGTAAACGGAGG
TTCGCGGAGCAACAAGCAGAAGAATGGTGGAAGGAAAACAAAGATAGGCTACTGAAAAAA
TACAGCCCTCCAAAGACAAACGTCGCGTCTGCTGATTCATCATTTCCTCCTCCACCAGCA
ACAGAGGAAAATAGTGAAACATCACAGGCTACATAG

Peptide Sequence

PEP ID

XP_016448795.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107773884, partial [Nicotiana tabacum]
Sequence

GLIALKKGTQLIKYSRKGKPKFCPFRVSPDETTLIWYSRGAERNLKLSSVSKIIPGQRTP
VFKRYLRPEKEYLSFSLIYNNGERSLDLICKDKIEAEIWIAGLKNLISAGQARNSRRTQS
DISDLQNTHPCGSTLDFSQTIARDWTSADHYSGETSLSVRSSDVGSERGNMQVRTSSDGF
RISVSSTPSCSSGGSGPDDIESLGDVYVWGEIWCDGVSKDGAGNPITIKHDVLSPKPLES
NVVLDVHQIACGVRHIALVTRQGEVFTWGEESGGRLGHGIEKDFSRPRLVEFLAVTNVDF
VSCGEYHTCAVSTLGDLYTWGDGTHNAGLLGHGNDVSHWIPKRVSGPLEGLQVLSVACGT
WHSALATANGKLFTFGDGSFGVLGHGDRESVLYPKEVQSLNGLKTIKVACGVWHTAAIVE
VTNHNCGNVPTRKLFTWGDGDKNRLGHGNKETYLLPTCVSAIIDYNFHQLACGHNITVGL
TTSGHVFIMGSNAYGQLGNPQADGKVPSLVQDKLVGEFVEEIVCGAFHVAVLTSRSEVFT
WGKGANGRLGHGDTEDRNAPTLVEALKDRHVKNIACGSNYTASICIHKWVSGADQSVCSG
CRQAFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCESCYMKLKKASEGS
SSFYDKKFNSSHRPENSKLDRGEPKTSRVLLSPTVEPIKYLEVKSTRPGIKSDSLSIVRA
SQVPSLLQLKDIAFPSSLSALQHALKPVVTAQPQPQSHSQSQSQSQPPSSNSRPASPYSR
RPSPPRSPAPVFSRGVIDSLRKTNDVLHQEVAKLQNQIKSLKQKSDGQDAEIKKLKESSQ
ESSRLVAERASKCNIAVETMKSITAQLKEMTQELPPDISESSALKSIQTQVESFLNTFGN
QASEDNTSLSSDMSYNQQKPTHRNNLSSESVIRNDQWDAAGVQETSHNVDGTIRENHGQS
ASETRGVHQSSAESVSGSPKAQREGQKEVIEQFEPGVYVTLLQLTNGTKIFKRVRFSKRR
FAEQQAEEWWKENKDRLLKKYSPPKTNVASADSSFPPPPATEENSETSQAT

Transcript Sequence

Gene sequence data has not been registered.